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Structure paper

TitleInsights into the structures of DNA damaged by hydroxyl radical: crystal structures of DNA duplexes containing 5-formyluracil
Journal, issue, pagesJ Nucleic Acids, Vol. 2010, Page 107289-107289, Year 2010
Publish dateJun 7, 2010 (structure data deposition date)
AuthorsTsunoda, M. / Sakaue, T. / Naito, S. / Sunami, T. / Abe, N. / Ueno, Y. / Matsuda, A. / Takenaka, A.
External linksJ Nucleic Acids / PubMed:20976303
MethodsX-ray diffraction
Resolution1.95 - 3.02 Å
Structure data

PDB-3ajj:
Crystal Structure of d(CGCGGATf5UCGCG): 5-Formyluridine/Guanosine Base-pair in B-DNA
Method: X-RAY DIFFRACTION / Resolution: 3.02 Å

PDB-3ajk:
Crystal structure of d(CGCGGATf5UCGCG): 5-Formyluridine:Guanosine Base-pair in B-DNA with Hoechst33258
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-3ajl:
Crystal structure of d(CGCGGATf5UCGCG): 5-Formyluridine:guanosine Base-pair in B-DNA with DAPI
Method: X-RAY DIFFRACTION / Resolution: 2.7 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-HT:
2'-(4-HYDROXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE

ChemComp-MG:
Unknown entry

ChemComp-DAP:
6-AMIDINE-2-(4-AMIDINO-PHENYL)INDOLE

KeywordsDNA / MODIFIED NUCLEOTIDE / FORMYLURIDINE / DNA DAMAGE / B-DNA / DOUBLE HELIX / DEOXYRIBONUCLEIC ACID

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