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Structure paper

TitleCrystal structures of glycinamide ribonucleotide synthetase, PurD, from thermophilic eubacteria
Journal, issue, pagesJ. Biochem., Vol. 148, Page 429-438, Year 2010
Publish dateOct 11, 2006 (structure data deposition date)
AuthorsSampei, G. / Baba, S. / Kanagawa, M. / Yanai, H. / Ishii, T. / Kawai, H. / Fukai, Y. / Ebihara, A. / Nakagawa, N. / Kawai, G.
External linksJ. Biochem. / PubMed:20716513
MethodsX-ray diffraction
Resolution1.8 - 2.8 Å
Structure data

PDB-2ip4:
Crystal Structure of Glycinamide Ribonucleotide Synthetase from Thermus thermophilus HB8
Method: X-RAY DIFFRACTION / Resolution: 2.8 Å

PDB-2yrw:
Crystal structure of GAR synthetase from Geobacillus kaustophilus
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-2yrx:
Crystal structure of GAR synthetase from Geobacillus kaustophilus
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-2ys6:
Crystal structure of GAR synthetase from Geobacillus kaustophilus
Method: X-RAY DIFFRACTION / Resolution: 2.21 Å

PDB-2ys7:
Crystal structure of GAR synthetase from Geobacillus kaustophilus
Method: X-RAY DIFFRACTION / Resolution: 2.21 Å

PDB-2yw2:
Crystal structure of GAR synthetase from Aquifex aeolicus in complex with ATP
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-2yya:
Crystal structure of GAR synthetase from Aquifex aeolicus
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

Chemicals

ChemComp-SO4:
SULFATE ION

ChemComp-HOH:
WATER

ChemComp-PO4:
PHOSPHATE ION

ChemComp-AMP:
ADENOSINE MONOPHOSPHATE / AMP*YM

ChemComp-GLY:
GLYCINE

ChemComp-ATP:
ADENOSINE-5'-TRIPHOSPHATE / ATP, energy-carrying molecule*YM

Source
  • thermus thermophilus (bacteria)
  • geobacillus kaustophilus (bacteria)
  • aquifex aeolicus (bacteria)
KeywordsLIGASE / GAR synthetase / PurD / thermus thermophilus / purine nucleotide / Structural Genomics / NPPSFA / National Project on Protein Structural and Functional Analyses / RIKEN Structural Genomics/Proteomics Initiative / RSGI / Glycinamide ribonucleotide synthetase / ATP binding / Purine nucleotide biosynthetic pathway

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