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Structure paper

TitleInduced-fit mechanism for prolyl endopeptidase
Journal, issue, pagesJ. Biol. Chem., Vol. 285, Page 21487-21495, Year 2010
Publish dateAug 31, 2009 (structure data deposition date)
AuthorsLi, M. / Chen, C. / Davies, D.R. / Chiu, T.K.
External linksJ. Biol. Chem. / PubMed:20444688
MethodsX-ray diffraction
Resolution1.8 - 2.4 Å
Structure data

PDB-3iuj:
apPEP_WT2 opened state
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-3iul:
apPEP_WT1 opened state
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-3ium:
apPEP_WTX opened state
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

PDB-3iun:
apPEP_D622N opened state
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-3iuq:
apPEP_D622N+PP closed state
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-3iur:
apPEP_D266Nx+H2H3 opened state
Method: X-RAY DIFFRACTION / Resolution: 2.05 Å

PDB-3ivm:
apPEP_WT+PP closed state
Method: X-RAY DIFFRACTION / Resolution: 2.05 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-GOL:
GLYCEROL

ChemComp-ZPR:
N-BENZYLOXYCARBONYL-L-PROLYL-L-PROLINAL

ChemComp-15P:
POLYETHYLENE GLYCOL (N=34) / precipitant*YM

Source
  • aeromonas punctata (bacteria)
KeywordsHYDROLASE / prolyl endopeptidase / Hydrolase/Hydrolase Inhibitor / Hydrolase-Hydrolase Inhibitor complex

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