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Structure paper

TitleFree and ATP-bound structures of Ap(4)A hydrolase from Aquifex aeolicus V5
Journal, issue, pagesActa Crystallogr. ,Sect. D, Vol. 66, Page 116-124, Year 2010
Publish dateJul 9, 2009 (structure data deposition date)
AuthorsJeyakanthan, J. / Kanaujia, S.P. / Nishida, Y. / Nakagawa, N. / Praveen, S. / Shinkai, A. / Kuramitsu, S. / Yokoyama, S. / Sekar, K.
External linksActa Crystallogr. ,Sect. D / PubMed:20124691
MethodsX-ray diffraction
Resolution1.8 - 1.95 Å
Structure data

PDB-3i7u:
Crystal structure of AP4A hydrolase (aq_158) from Aquifex aeolicus VF5
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-3i7v:
Crystal structure of AP4A hydrolase complexed with AP4A (ATP) (aq_158) from Aquifex aeolicus Vf5
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

Chemicals

ChemComp-CL:
Unknown entry

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-TRS:
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL / pH buffer*YM

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-PG4:
TETRAETHYLENE GLYCOL / precipitant*YM

ChemComp-HOH:
WATER

ChemComp-ATP:
ADENOSINE-5'-TRIPHOSPHATE / ATP, energy-carrying molecule*YM

ChemComp-B4P:
BIS(ADENOSINE)-5'-TETRAPHOSPHATE

ChemComp-GOL:
GLYCEROL

Source
  • aquifex aeolicus (bacteria)
  • aquifex aeolicus vf5 (bacteria)
KeywordsHYDROLASE / NUDIX PROTEIN / DIADENOSINE POLYPHOSPHATE / AP4A / STRUCTURAL GENOMICS / NPPSFA / NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES / RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE / RSGI

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