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TitleStructure-Function Relationships in Miscoding by Sulfolobus Solfataricus DNA Polymerase Dpo4: Guanine N2,N2-Dimethyl Substitution Produces Inactive and Miscoding Polymerase Complexes.
Journal, issue, pagesJ. Biol. Chem., Vol. 284, Page 17687-, Year 2009
Publish dateJan 22, 2009 (structure data deposition date)
AuthorsZhang, H. / Eoff, R.L. / Kozekov, I.D. / Rizzo, C.J. / Egli, M. / Guengerich, F.P.
External linksJ. Biol. Chem. / PubMed:19542237
MethodsX-ray diffraction
Resolution2.28 - 2.9 Å
Structure data

PDB-2w9a:
Ternary complex of Dpo4 bound to N2,N2-dimethyl-deoxyguanosine modified DNA with incoming dGTP
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-2w9b:
Binary complex of Dpo4 bound to N2,N2-dimethyl-deoxyguanosine modified DNA
Method: X-RAY DIFFRACTION / Resolution: 2.28 Å

PDB-2w9c:
Ternary complex of Dpo4 bound to N2,N2-dimethyl-deoxyguanosine modified DNA with incoming dTTP
Method: X-RAY DIFFRACTION / Resolution: 2.9 Å

Chemicals

ChemComp-DGT:
2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE

ChemComp-MG:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-TTP:
THYMIDINE-5'-TRIPHOSPHATE

Source
  • sulfolobus solfataricus (archaea)
KeywordsTRANSFERASE/DNA / TRANSFERASE DNA COMPLEX / N2-DIMETHYL-G / METAL-BINDING / MUTATOR PROTEIN / NUCLEOTIDYLTRANSFERASE / DNA-DIRECTED DNA POLYMERASE / DNA DAMAGE / DNA REPAIR / DNA-BINDING / TRANSFERASE / DNA REPLICATION / DNA / DPO4 / ADDUCT / CYTOPLASM / MAGNESIUM / POLYMERASE / TRANSFERASE-DNA complex

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