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Structure paper

TitleThe crystal structure of galacto-N-biose/lacto-N-biose I phosphorylase: A large deformation of a tim barrel scaffold
Journal, issue, pagesJ. Biol. Chem., Vol. 284, Page 7273-7283, Year 2009
Publish dateOct 28, 2008 (structure data deposition date)
AuthorsHidaka, M. / Nishimoto, M. / Kitaoka, M. / Wakagi, T. / Shoun, H. / Fushinobu, S.
External linksJ. Biol. Chem. / PubMed:19124470
MethodsX-ray diffraction
Resolution1.85 - 2.3 Å
Structure data

PDB-2zus:
Crystal structure of Galacto-N-biose/Lacto-N-biose I phosphorylase
Method: X-RAY DIFFRACTION / Resolution: 2.11 Å

PDB-2zut:
Crystal structure of Galacto-N-biose/Lacto-N-biose I phosphorylase in complex with GalNAc
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-2zuu:
Crystal structure of Galacto-N-biose/Lacto-N-biose I phosphorylase in complex with GlcNAc
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-2zuv:
Crystal structure of Galacto-N-biose/Lacto-N-biose I phosphorylase in complex with GlcNAc, Ethylene glycol, and nitrate
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-2zuw:
Crystal structure of Galacto-N-biose/Lacto-N-biose I phosphorylase in complex with GlcNAc and sulfate
Method: X-RAY DIFFRACTION / Resolution: 2.11 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-A2G:
2-acetamido-2-deoxy-alpha-D-galactopyranose

ChemComp-GOL:
GLYCEROL

ChemComp-NO3:
NITRATE ION

ChemComp-NDG:
2-acetamido-2-deoxy-alpha-D-glucopyranose

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-SO4:
SULFATE ION

Source
  • bifidobacterium longum (bacteria)
KeywordsTRANSFERASE / beta-alpha-barrel / TIM barrel / Glycosyltransferase

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