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Structure paper

TitleThe RNA polymerase "switch region" is a target for inhibitors.
Journal, issue, pagesCell(Cambridge,Mass. ), Vol. 135, Page 295-307, Year 2008
Publish dateJul 24, 2008 (structure data deposition date)
AuthorsMukhopadhyay, J. / Das, K. / Ismail, S. / Koppstein, D. / Jang, M. / Hudson, B. / Sarafianos, S. / Tuske, S. / Patel, J. / Jansen, R. ...Mukhopadhyay, J. / Das, K. / Ismail, S. / Koppstein, D. / Jang, M. / Hudson, B. / Sarafianos, S. / Tuske, S. / Patel, J. / Jansen, R. / Irschik, H. / Arnold, E. / Ebright, R.H.
External linksCell(Cambridge,Mass. ) / PubMed:18957204
MethodsX-ray diffraction
Resolution3 Å
Structure data

PDB-3dxj:
Crystal structure of thermus thermophilus rna polymerase holoenzyme in complex with the antibiotic myxopyronin
Method: X-RAY DIFFRACTION / Resolution: 3 Å

Chemicals

ChemComp-PO4:
PHOSPHATE ION

ChemComp-MG:
Unknown entry

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

ChemComp-ZN:
Unknown entry

ChemComp-NE6:
methyl [(1E,5R)-5-{(3S)-3-[(2E,4E)-2,5-dimethylocta-2,4-dienoyl]-2,4-dioxo-3,4-dihydro-2H-pyran-6-yl}hexylidene]carbamate

ChemComp-HOH:
WATER

Source
  • thermus thermophilus hb8 (bacteria)
KeywordsTRANSCRIPTION / TRANSFERASE / RNA POLYMERASE; RNAP; DRUG COMPLEX; INHIBITOR; corallopyronin; ripostatin; TRANSCRIPTION; HOLOENZYME; CRYSTALLOGRAPHY; TWINNING; HEMIHEDRAL / DNA-directed RNA polymerase / Nucleotidyltransferase / DNA-binding / Sigma factor / Transcription regulation

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