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Author
Journal
IF

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Structure paper

TitleEnzymes with lid-gated active sites must operate by an induced fit mechanism instead of conformational selection.
Journal, issue, pagesProc. Natl. Acad. Sci. Usa, Vol. 105, Page 13829-13834, Year 2008
Publish dateJul 14, 2008 (structure data deposition date)
AuthorsSullivan, S.M. / Holyoak, T.
External linksProc. Natl. Acad. Sci. Usa / PubMed:18772387
MethodsX-ray diffraction
Resolution1.3 - 1.5 Å
Structure data

PDB-3dt2:
The structure of rat cytosolic PEPCK in complex with oxalate and GTP
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-3dt4:
The structure of rat cytosolic PEPCK in complex with oxalate and GTP
Method: X-RAY DIFFRACTION / Resolution: 1.45 Å

PDB-3dt7:
The structure of rat cytosolic PEPCK in complex with beta-sulfopyruvate and GTP
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-3dtb:
The structure of rat cytosolic PEPCK in complex with phosphoglycolate and GDP
Method: X-RAY DIFFRACTION / Resolution: 1.3 Å

Chemicals

ChemComp-MN:
Unknown entry

ChemComp-OXL:
OXALATE ION

ChemComp-NA:
Unknown entry

ChemComp-GTP:
GUANOSINE-5'-TRIPHOSPHATE / GTP, energy-carrying molecule*YM

ChemComp-1PE:
PENTAETHYLENE GLYCOL / precipitant*YM

ChemComp-HOH:
WATER

ChemComp-SPV:
SULFOPYRUVATE

ChemComp-ETX:
2-ETHOXYETHANOL

ChemComp-PGA:
2-PHOSPHOGLYCOLIC ACID

ChemComp-BCT:
BICARBONATE ION / pH buffer*YM

ChemComp-GDP:
GUANOSINE-5'-DIPHOSPHATE / GDP, energy-carrying molecule*YM

ChemComp-EPE:
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID / pH buffer*YM

Source
  • rattus norvegicus (Norway rat)
KeywordsLYASE / kinase / gluconeogenesis / Decarboxylase / GTP-binding / Nucleotide-binding

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