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Structure paper

TitleElucidation of different binding modes of purine nucleosides to human deoxycytidine kinase
Journal, issue, pagesJ. Med. Chem., Vol. 51, Page 4219-4225, Year 2008
Publish dateFeb 13, 2008 (structure data deposition date)
AuthorsSabini, E. / Hazra, S. / Konrad, M. / Lavie, A.
External linksJ. Med. Chem. / PubMed:18570408
MethodsX-ray diffraction
Resolution1.8 - 2.51 Å
Structure data

PDB-2zi7:
C4S dCK variant of dCK in complex with D-dG+UDP
Method: X-RAY DIFFRACTION / Resolution: 1.97 Å

PDB-2zi9:
C4S-E247A dCK variant of dCK in complex with cladribine+ADP
Method: X-RAY DIFFRACTION / Resolution: 2.51 Å

PDB-2zia:
C4S dCK variant of dCK in complex with cladribine+UDP
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

Chemicals

ChemComp-GNG:
2'-DEOXY-GUANOSINE

ChemComp-UDP:
URIDINE-5'-DIPHOSPHATE / UDP*YM

ChemComp-HOH:
WATER

ChemComp-ADP:
ADENOSINE-5'-DIPHOSPHATE / ADP, energy-carrying molecule*YM

ChemComp-CL9:
2-chloro-2'-deoxyadenosine / medication*YM

Source
  • homo sapiens (human)
KeywordsTRANSFERASE / dCK / purine / deoxyguanosine / deoxycytidine kinase / nucleoside / enantiomer / D-dG / dG / ATP-binding / Nucleotide-binding / Nucleus / Phosphoprotein / cladribine / deoxyadenosine analog / 2-chloro-2'-deoxyadenosine / UDP

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