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Structure paper

TitleCrystal structure of family 5 uracil-DNA glycosylase bound to DNA.
Journal, issue, pagesJ. Mol. Biol., Vol. 373, Page 839-850, Year 2007
Publish dateOct 4, 2005 (structure data deposition date)
AuthorsKosaka, H. / Hoseki, J. / Nakagawa, N. / Kuramitsu, S. / Masui, R.
External linksJ. Mol. Biol. / PubMed:17870091
MethodsX-ray diffraction
Resolution1.55 - 2.1 Å
Structure data

PDB-2d3y:
Crystal structure of uracil-DNA glycosylase from Thermus Thermophilus HB8
Method: X-RAY DIFFRACTION / Resolution: 1.55 Å

PDB-2ddg:
Crystal structure of uracil-DNA glycosylase in complex with AP:G containing DNA
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-2dem:
Crystal structure of Uracil-DNA glycosylase in complex with AP:A containing DNA
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

Chemicals

ChemComp-ACT:
ACETATE ION

ChemComp-SF4:
IRON/SULFUR CLUSTER

ChemComp-DU:
2'-DEOXYURIDINE-5'-MONOPHOSPHATE

ChemComp-HOH:
WATER

ChemComp-2HP:
DIHYDROGENPHOSPHATE ION

ChemComp-GOL:
GLYCEROL

ChemComp-EOH:
ETHANOL

Source
  • thermus thermophilus (bacteria)
  • synthetic construct (others)
KeywordsHYDROLASE / base excision repair / uracil-DNA glycosylase / Iron/Sulfer cluster / Thermophile / Structural Genomics / NPPSFA / National Project on Protein Structural and Functional Analyses / RIKEN Structural Genomics/Proteomics Initiative / RSGI / HYDROLASE/DNA / DNA complex / HYDROLASE-DNA COMPLEX / Iron/Sulfur cluster

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