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TitleA structural gap in Dpo4 supports mutagenic bypass of a major benzo[a]pyrene dG adduct in DNA through template misalignment.
Journal, issue, pagesProc. Natl. Acad. Sci. Usa, Vol. 104, Page 14905-14910, Year 2007
Publish dateSep 7, 2006 (structure data deposition date)
AuthorsBauer, J. / Xing, G. / Yagi, H. / Sayer, J.M. / Jerina, D.M. / Ling, H.
External linksProc. Natl. Acad. Sci. Usa / PubMed:17848527
MethodsX-ray diffraction
Resolution2.25 - 2.5 Å
Structure data

PDB-2ia6:
Bypass of Major Benzopyrene-dG Adduct by Y-Family DNA Polymerase with Unique Structural Gap
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-2ibk:
Bypass of Major Benzopyrene-dG Adduct by Y-Family DNA Polymerase with Unique Structural Gap
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

Chemicals

ChemComp-PO4:
PHOSPHATE ION

ChemComp-CA:
Unknown entry

ChemComp-ATP:
ADENOSINE-5'-TRIPHOSPHATE / ATP, energy-carrying molecule*YM

ChemComp-GOL:
GLYCEROL

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-BAP:
1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE

ChemComp-HOH:
WATER

ChemComp-POP:
PYROPHOSPHATE 2-

Source
  • sulfolobus solfataricus (archaea)
KeywordsTRANSFERASE/DNA / Benzo pyrene / Carcinogen / Lesion bypass / Polymerase / translesion synthesis / dpo4 / TRANSFERASE-DNA COMPLEX

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