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Structure paper

TitleStructures of phi29 DNA polymerase complexed with substrate: the mechanism of translocation in B-family polymerases
Journal, issue, pagesEmbo J., Vol. 26, Page 3494-3505, Year 2007
Publish dateMay 15, 2007 (structure data deposition date)
AuthorsBerman, A.J. / Kamtekar, S. / Goodman, J.L. / Lazaro, J.M. / de Vega, M. / Blanco, L. / Salas, M. / Steitz, T.A.
External linksEmbo J. / PubMed:17611604
MethodsX-ray diffraction
Resolution1.6 - 2.6 Å
Structure data

PDB-2py5:
Phi29 DNA polymerase complexed with single-stranded DNA
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-2pyj:
Phi29 DNA polymerase complexed with primer-template DNA and incoming nucleotide substrates (ternary complex)
Method: X-RAY DIFFRACTION / Resolution: 2.03 Å

PDB-2pyl:
Phi29 DNA polymerase complexed with primer-template DNA and incoming nucleotide substrates (ternary complex)
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-2pzs:
Phi29 DNA polymerase complexed with primer-template DNA (post-translocation binary complex)
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

Chemicals

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-HOH:
WATER

ChemComp-MN:
Unknown entry

ChemComp-MG:
Unknown entry

ChemComp-DGT:
2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE

ChemComp-TTP:
THYMIDINE-5'-TRIPHOSPHATE

Source
  • bacillus phage phi29 (virus)
KeywordsREPLICATION / TRANSFERASE/DNA / protein-dna complex / TRANSFERASE-DNA COMPLEX

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