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TitleStructural and Functional Characterization of Enantiomeric Glutamic Acid Derivatives as Potential Transition State Analogue Inhibitors of Murd Ligase.
Journal, issue, pagesJ. Mol. Biol., Vol. 370, Page 107-, Year 2007
Publish dateFeb 1, 2007 (structure data deposition date)
AuthorsKotnik, M. / Humljan, J. / Contreras-Martel, C. / Oblak, M. / Kristan, K. / Herve, M. / Blanot, D. / Urleb, U. / Gobec, S. / Dessen, A. / Solmajer, T.
External linksJ. Mol. Biol. / PubMed:17507028
MethodsX-ray diffraction
Resolution1.52 - 1.97 Å
Structure data

PDB-2jff:
Crystal structure of MurD ligase in complex with D-Glu containing sulfonamide inhibitor
Method: X-RAY DIFFRACTION / Resolution: 1.89 Å

PDB-2jfg:
Crystal structure of MurD ligase in complex with UMA and ADP
Method: X-RAY DIFFRACTION / Resolution: 1.52 Å

PDB-2jfh:
Crystal structure of MurD ligase in complex with L-Glu containing sulfonamide inhibitor
Method: X-RAY DIFFRACTION / Resolution: 1.97 Å

Chemicals

ChemComp-LK2:
N-[(6-BUTOXYNAPHTHALEN-2-YL)SULFONYL]-D-GLUTAMIC ACID

ChemComp-SO4:
SULFATE ION

ChemComp-HOH:
WATER

ChemComp-UMA:
URIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE

ChemComp-ADP:
ADENOSINE-5'-DIPHOSPHATE / ADP, energy-carrying molecule*YM

ChemComp-LK1:
N-[(6-BUTOXYNAPHTHALEN-2-YL)SULFONYL]-L-GLUTAMIC ACID

Source
  • escherichia coli (E. coli)
KeywordsLIGASE / MURD-INHIBITOR COMPLEX / PEPTIDOGLYCAN SYNTHESIS / CELL WALL / CELL SHAPE / CELL CYCLE / NUCLEOTIDE-BINDING / SULFONAMIDE INHIBITOR / MURD LIGASE / ATP-BINDING / CELL DIVISION / UMA / ADP

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