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Structure paper

TitleStructural Basis of the Nickel Response in Helicobacter Pylori: Crystal Structures of Hpnikr in Apo and Nickel-Bound States.
Journal, issue, pagesJ. Mol. Biol., Vol. 361, Page 715-, Year 2006
Publish dateDec 20, 2005 (structure data deposition date)
AuthorsDian, C. / Schauer, K. / Kapp, U. / Mcsweeney, S.M. / Labigne, A. / Terradot, L.
External linksJ. Mol. Biol. / PubMed:16872629
MethodsX-ray diffraction
Resolution2.05 - 2.35 Å
Structure data

PDB-2ca9:
apo-NIKR from helicobacter pylori in closed trans-conformation
Method: X-RAY DIFFRACTION / Resolution: 2.05 Å

PDB-2cad:
NikR from Helicobacter pylori in closed trans-conformation and nickel bound to 2F, 2X and 2I sites.
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-2caj:
NikR from Helicobacter pylori in closed trans-conformation and nickel bound to 4 intermediary sites
Method: X-RAY DIFFRACTION / Resolution: 2.35 Å

Chemicals

ChemComp-FMT:
FORMIC ACID

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-NI:
NICKEL (II) ION

ChemComp-CIT:
CITRIC ACID

ChemComp-CL:
Unknown entry

Source
  • helicobacter pylori (bacteria)
KeywordsTRANSCRIPTION / NICKEL UPTAKE / TRANSCRIPTION REGULATOR / RIBBON-HELIX-HELIX / ACIDIC-ADAPTIVE RESPONSE / TRANSCRIPTIONAL REGULATION / DNA-BINDING / METAL-BINDING / HYPOTHETICAL PROTEIN / NICKEL

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