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Structure paper

TitleHigh resolution structures of p-aminobenzamidine- and benzamidine-VIIa/soluble tissue factor: unpredicted conformation of the 192-193 peptide bond and mapping of Ca2+, Mg2+, Na+, and Zn2+ sites in factor VIIa.
Journal, issue, pagesJ. Biol. Chem., Vol. 281, Page 24873-24888, Year 2006
Publish dateJun 22, 2005 (structure data deposition date)
AuthorsBajaj, S.P. / Schmidt, A.E. / Agah, S. / Bajaj, M.S. / Padmanabhan, K.
External linksJ. Biol. Chem. / PubMed:16757484
MethodsX-ray diffraction
Resolution1.8 - 2 Å
Structure data

PDB-2a2q:
Complex of Active-site Inhibited Human Coagulation Factor VIIa with Human Soluble Tissue Factor in the Presence of Ca2+, Mg2+, Na+, and Zn2+
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-2aer:
Crystal Structure of Benzamidine-Factor VIIa/Soluble Tissue Factor complex.
Method: X-RAY DIFFRACTION / Resolution: 1.87 Å

PDB-2fir:
Crystal structure of DFPR-VIIa/sTF
Method: X-RAY DIFFRACTION / Resolution: 2 Å

Chemicals

ChemComp-GLC:
alpha-D-glucopyranose

ChemComp-FUC:
alpha-L-fucopyranose

ChemComp-MG:
Unknown entry

ChemComp-CA:
Unknown entry

ChemComp-NA:
Unknown entry

ChemComp-ZN:
Unknown entry

ChemComp-CL:
Unknown entry

ChemComp-PBZ:
P-AMINO BENZAMIDINE

ChemComp-HOH:
WATER

ChemComp-BEN:
BENZAMIDINE

ChemComp-0G7:
D-phenylalanyl-N-[(3S)-6-carbamimidamido-1-chloro-2-oxohexan-3-yl]-L-prolinamide

Source
  • homo sapiens (human)
KeywordsHYDROLASE/BLOOD CLOTTING / Factor VIIa / Soluble Tissue Factor / Mg2+ / Ca2+ / Na+ / Zn2+ / HYDROLASE-BLOOD CLOTTING COMPLEX / BLOOD CLOTTING / Serine Protease / calcium / Magnesium / Zinc / Sodium / Tissue Factor / Benzamidine / blood coagulation / clotting / blood / coagulation / clotting factor / coagulation factor / HYDROLASE/HYDROLASE INHIBITOR / oxyanion hole / HYDROLASE-HYDROLASE INHIBITOR complex

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