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Structure paper

TitleStructure of Pyrococcus Horikoshii Nikr: Nickel Sensing and Implications for the Regulation of DNA Recognition
Journal, issue, pagesJ. Mol. Biol., Vol. 348, Page 597-, Year 2005
Publish dateJan 27, 2005 (structure data deposition date)
AuthorsChivers, P.T. / Tahirov, T.H.
External linksJ. Mol. Biol. / PubMed:15826657
MethodsX-ray diffraction
Resolution2.1 - 3 Å
Structure data

PDB-2bj1:
NIKR IN OPEN CONFORMATION AND NICKEL BOUND TO HIGH-AFFINITY SITES
Method: X-RAY DIFFRACTION / Resolution: 3 Å

PDB-2bj3:
NIKR-apo
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-2bj7:
NIKR IN CLOSED CONFORMATION AND NICKEL BOUND TO HIGH-AFFINITY SITES
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-2bj8:
NIKR IN CLOSED CONFORMATION AND NICKEL BOUND TO HIGH and LOW-AFFINITY SITES
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-2bj9:
NIKR with bound NICKEL and phosphate
Method: X-RAY DIFFRACTION / Resolution: 3 Å

Chemicals

ChemComp-NI:
NICKEL (II) ION

ChemComp-CL:
Unknown entry

ChemComp-MG:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-PG4:
TETRAETHYLENE GLYCOL / precipitant*YM

ChemComp-EPE:
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID / pH buffer*YM

ChemComp-PO4:
PHOSPHATE ION

Source
  • pyrococcus horikoshii (archaea)
KeywordsTRANSCRIPTION / REPRESSOR / PYROCOCCUS HORIKOSHII / NIKR / DNA-BINDING / METAL-BINDING / NICKEL / TRANSCRIPTION REGULATION / RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE / RSGI / STRUCTURAL GENOMICS

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