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Structure paper

TitleStructural differences between the ready and unready oxidized states of [NiFe] hydrogenases.
Journal, issue, pagesJ. Biol. Inorg. Chem., Vol. 10, Page 239-249, Year 2005
Publish dateFeb 1, 2005 (structure data deposition date)
AuthorsVolbeda, A. / Martin, L. / Cavazza, C. / Matho, M. / Faber, B.W. / Roseboom, W. / Albracht, S.P. / Garcin, E. / Rousset, M. / Fontecilla-Camps, J.C.
External linksJ. Biol. Inorg. Chem. / PubMed:15803334
MethodsX-ray diffraction
Resolution1.83 - 2.35 Å
Structure data

PDB-1yq9:
Structure of the unready oxidized form of [NiFe] hydrogenase
Method: X-RAY DIFFRACTION / Resolution: 2.35 Å

PDB-1yqw:
Structure of the Oxidized Unready Form of Ni-Fe Hydrogenase
Method: X-RAY DIFFRACTION / Resolution: 1.83 Å

PDB-1yrq:
Structure of the ready oxidized form of [NiFe]-hydrogenase
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

Chemicals

ChemComp-SF4:
IRON/SULFUR CLUSTER

ChemComp-F3S:
FE3-S4 CLUSTER

ChemComp-H2S:
HYDROSULFURIC ACID

ChemComp-GOL:
GLYCEROL

ChemComp-NI:
NICKEL (II) ION

ChemComp-MG:
Unknown entry

ChemComp-FCO:
CARBONMONOXIDE-(DICYANO) IRON

ChemComp-PER:
PEROXIDE ION

ChemComp-HOH:
WATER

ChemComp-FE2:
Unknown entry

ChemComp-BCT:
BICARBONATE ION / pH buffer*YM

Source
  • desulfovibrio gigas (bacteria)
  • desulfovibrio fructosovorans (bacteria)
KeywordsOXIDOREDUCTASE / NI-FE HYDROGENASE UNREADY STATE / NiB state / hydroxide bridge

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