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TitleOrnithine Cyclodeaminase: Structure, Mechanism of Action, and Implications for the u-Crystallin Family;
Journal, issue, pagesBiochemistry, Vol. 43, Page 13883-13891, Year 2004
Publish dateAug 3, 2004 (structure data deposition date)
AuthorsGoodman, J.L. / Wang, S. / Alam, S. / Ruzicka, F.J. / Frey, P.A. / Wedekind, J.E.
External linksBiochemistry / PubMed:15518536
MethodsX-ray diffraction
Resolution1.6 - 1.8 Å
Structure data

PDB-1u7h:
Structure and a Proposed Mechanism for Ornithine Cyclodeaminase from Pseudomonas putida
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-1x7d:
Crystal Structure Analysis of Ornithine Cyclodeaminase Complexed with NAD and ornithine to 1.6 Angstroms
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

Chemicals

ChemComp-NA:
Unknown entry

ChemComp-NAD:
NICOTINAMIDE-ADENINE-DINUCLEOTIDE / NAD*YM

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

ChemComp-HOH:
WATER

ChemComp-ORN:
L-ornithine

ChemComp-MES:
2-(N-MORPHOLINO)-ETHANESULFONIC ACID / pH buffer*YM

Source
  • pseudomonas putida (bacteria)
KeywordsLYASE / deaminase / Binds NAD+ / Binds L-ornithine / Binds L-Pro / helix bundle / beta barrel / Rossmann fold / binds L-proline / 2 Helix Bundle

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