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Structure paper

TitleInhibition of Human Alpha-Thrombin by a Phosphonate Tripeptide Proceeds Via a Metastable Pentacoordinated Phosphorus Intermediate
Journal, issue, pagesJ. Mol. Biol., Vol. 311, Page 549-, Year 2001
Publish dateFeb 1, 2001 (structure data deposition date)
AuthorsSkordalakes, E. / Dodson, G.G. / Green, D.S. / Goodwin, C.A. / Scully, M.F. / Hudson, H.R. / Kakkar, V.V. / Deadman, J.J.
External linksJ. Mol. Biol. / PubMed:11493008
MethodsX-ray diffraction
Resolution1.4 - 1.75 Å
Structure data

PDB-1h8d:
X-ray structure of the human alpha-thrombin complex with a tripeptide phosphonate inhibitor.
Method: X-RAY DIFFRACTION / Resolution: 1.4 Å

PDB-1h8i:
X-ray crystal structure of human alpha-thrombin with a tripeptide phosphonate inhibitor.
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

Chemicals

ChemComp-PHW:
N-[(benzyloxy)carbonyl]-beta-phenyl-D-phenylalanyl-N-{(1S,3E)-1-[dihydroxy(diphenoxy)-lambda~5~-phosphanyl]-4-methoxybut-3-en-1-yl}-L-prolinamide

ChemComp-HOH:
WATER

ChemComp-PHV:
N-[(benzyloxy)carbonyl]-beta-phenyl-D-phenylalanyl-N-[(1S)-4-methoxy-1-phosphonobutyl]-L-prolinamide

Source
  • homo sapiens (human)
  • hirudo medicinalis (medicinal leech)
KeywordsHYDROLASE/HYDROLASE INHIBITOR / SERINE PROTEASE / HYDROLASE-HYDROLASE INHIBITOR COMPLEX

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