eF-site ID 5o6t-ABCD
PDB Code 5o6t
Chain A, B, C, D

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Title BIRC4 RING in complex with dimeric ubiquitin variant
Classification LIGASE
Compound E3 ubiquitin-protein ligase XIAP
Source Homo sapiens (Human) (UBB_HUMAN)
Sequence A:  EISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQ
CAEAVDKCPMCYTVITFKQKIFMS
B:  ISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQC
AEAVDKCPMCYTVITFKQKIFMS
C:  SMQILVTTISAETIRLEVEPSDTIENVKAKIQDKEGIPPD
QQRLFFEGKQLEDGRTLSDYNINKKSTLLLVVKFH
D:  SMQILVTTISAETIRLEVEPSDTIENVKAKIQDKEGIPPD
QQRLFFEGKQLEDGRTLSDYNINKKSTLLLVVKF
Description


Functional site

1) chain A
residue 450
type
sequence C
description binding site for residue ZN A 1001
source : AC1

2) chain A
residue 453
type
sequence C
description binding site for residue ZN A 1001
source : AC1

3) chain A
residue 471
type
sequence C
description binding site for residue ZN A 1001
source : AC1

4) chain A
residue 474
type
sequence C
description binding site for residue ZN A 1001
source : AC1

5) chain A
residue 465
type
sequence C
description binding site for residue ZN A 1002
source : AC2

6) chain A
residue 467
type
sequence H
description binding site for residue ZN A 1002
source : AC2

7) chain A
residue 481
type
sequence C
description binding site for residue ZN A 1002
source : AC2

8) chain A
residue 484
type
sequence C
description binding site for residue ZN A 1002
source : AC2

9) chain A
residue 495
type
sequence F
description binding site for residue EDO A 1003
source : AC3

10) chain A
residue 497
type
sequence S
description binding site for residue EDO A 1003
source : AC3

11) chain C
residue 54
type
sequence R
description binding site for residue EDO A 1003
source : AC3

12) chain B
residue 450
type
sequence C
description binding site for residue ZN B 501
source : AC4

13) chain B
residue 453
type
sequence C
description binding site for residue ZN B 501
source : AC4

14) chain B
residue 471
type
sequence C
description binding site for residue ZN B 501
source : AC4

15) chain B
residue 474
type
sequence C
description binding site for residue ZN B 501
source : AC4

16) chain B
residue 465
type
sequence C
description binding site for residue ZN B 502
source : AC5

17) chain B
residue 467
type
sequence H
description binding site for residue ZN B 502
source : AC5

18) chain B
residue 481
type
sequence C
description binding site for residue ZN B 502
source : AC5

19) chain B
residue 484
type
sequence C
description binding site for residue ZN B 502
source : AC5

20) chain B
residue 496
type
sequence M
description binding site for residue EDO B 503
source : AC6

21) chain B
residue 497
type
sequence S
description binding site for residue EDO B 503
source : AC6

22) chain D
residue 54
type
sequence R
description binding site for residue EDO B 503
source : AC6

23) chain D
residue 58
type
sequence D
description binding site for residue EDO B 503
source : AC6

24) chain C
residue 0
type MOD_RES
sequence S
description ADP-ribosylglycine => ECO:0000269|PubMed:28525742
source Swiss-Prot : SWS_FT_FI1

25) chain D
residue 0
type MOD_RES
sequence S
description ADP-ribosylglycine => ECO:0000269|PubMed:28525742
source Swiss-Prot : SWS_FT_FI1

26) chain C
residue 0
type CROSSLNK
sequence S
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
source Swiss-Prot : SWS_FT_FI2

27) chain B
residue 450
type CROSSLNK
sequence C
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
source Swiss-Prot : SWS_FT_FI2

28) chain D
residue 0
type CROSSLNK
sequence S
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
source Swiss-Prot : SWS_FT_FI2


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