eF-site ID 5nvn-ABCD
PDB Code 5nvn
Chain A, B, C, D

click to enlarge
Title Crystal structure of the human 4EHP-4E-BP1 complex
Classification TRANSLATION
Compound Eukaryotic translation initiation factor 4E type 2
Source Homo sapiens (Human) (4EBP1_HUMAN)
Sequence A:  GPHMLEAEHPLQYNYTFWYSRNIKQIGTFASVEQFWRFYS
HMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGGKWIIRL
RKGLASRCWENLILAMLGEQFMVGEEICGAVVSVRFQEDI
ISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEYKTHTD
SIKMP
B:  TRIIYDRKFLMECRNSPVTKTPPRDLPTIPGVTS
C:  GPHMLEAEHPLQYNYTFWYSRRNIKQIGTFASVEQFWRFY
SHMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGGKWIIR
LRKGLASRCWENLILAMLGEQFMVGEEICGAVVSVRFQED
IISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEYKTHT
DSIKMP
D:  MTRIIYDRKFLMECRNSPVTKTPPRDLPTIPGVTS
Description


Functional site

1) chain A
residue 93
type
sequence Q
description binding site for residue FMT A 301
source : AC1

2) chain A
residue 96
type
sequence R
description binding site for residue FMT A 301
source : AC1

3) chain B
residue 72
type
sequence P
description binding site for residue FMT A 301
source : AC1

4) chain B
residue 74
type
sequence D
description binding site for residue FMT A 301
source : AC1

5) chain C
residue 198
type
sequence D
description binding site for residue FMT A 301
source : AC1

6) chain B
residue 73
type
sequence R
description binding site for residue FMT C 301
source : AC2

7) chain C
residue 199
type
sequence T
description binding site for residue FMT C 301
source : AC2

8) chain C
residue 202
type
sequence R
description binding site for residue FMT C 301
source : AC2

9) chain B
residue 73
type
sequence R
description binding site for residue FMT C 302
source : AC3

10) chain C
residue 160
type
sequence F
description binding site for residue FMT C 302
source : AC3

11) chain C
residue 161
type
sequence M
description binding site for residue FMT C 302
source : AC3

12) chain C
residue 195
type
sequence R
description binding site for residue FMT C 302
source : AC3

13) chain C
residue 199
type
sequence T
description binding site for residue FMT C 302
source : AC3

14) chain C
residue 139
type
sequence L
description binding site for residue FMT C 303
source : AC4

15) chain C
residue 140
type
sequence R
description binding site for residue FMT C 303
source : AC4

16) chain C
residue 143
type
sequence L
description binding site for residue FMT C 303
source : AC4

17) chain C
residue 177
type
sequence E
description binding site for residue FMT C 304
source : AC5

18) chain C
residue 146
type
sequence R
description binding site for residue FMT C 305
source : AC6

19) chain C
residue 150
type
sequence N
description binding site for residue FMT C 305
source : AC6

20) chain C
residue 205
type
sequence N
description binding site for residue FMT C 305
source : AC6

21) chain D
residue 56
type
sequence R
description binding site for residue FMT C 305
source : AC6

22) chain C
residue 222
type
sequence K
description binding site for residue FMT C 306
source : AC7

23) chain A
residue 112-135
type prosite
sequence DFHLFKEGIKPMWEDDANKNGGKW
description IF4E Eukaryotic initiation factor 4E signature. DFhlFKegIkPmWEDdanknGGKW
source prosite : PS00813

24) chain B
residue 50
type MOD_RES
sequence T
description Phosphothreonine => ECO:0007744|PubMed:18220336, ECO:0007744|PubMed:18669648
source Swiss-Prot : SWS_FT_FI1

25) chain D
residue 50
type MOD_RES
sequence T
description Phosphothreonine => ECO:0007744|PubMed:18220336, ECO:0007744|PubMed:18669648
source Swiss-Prot : SWS_FT_FI1

26) chain C
residue 222
type MOD_RES
sequence K
description Phosphothreonine => ECO:0007744|PubMed:18220336, ECO:0007744|PubMed:18669648
source Swiss-Prot : SWS_FT_FI1

27) chain B
residue 54
type MOD_RES
sequence Y
description Phosphotyrosine => ECO:0007744|PubMed:18669648
source Swiss-Prot : SWS_FT_FI2

28) chain D
residue 54
type MOD_RES
sequence Y
description Phosphotyrosine => ECO:0007744|PubMed:18669648
source Swiss-Prot : SWS_FT_FI2

29) chain A
residue 174
type MOD_RES
sequence R
description Phosphotyrosine => ECO:0007744|PubMed:18669648
source Swiss-Prot : SWS_FT_FI2

30) chain C
residue 110
type MOD_RES
sequence H
description Phosphotyrosine => ECO:0007744|PubMed:18669648
source Swiss-Prot : SWS_FT_FI2

31) chain C
residue 124
type MOD_RES
sequence W
description Phosphotyrosine => ECO:0007744|PubMed:18669648
source Swiss-Prot : SWS_FT_FI2

32) chain C
residue 174
type MOD_RES
sequence R
description Phosphotyrosine => ECO:0007744|PubMed:18669648
source Swiss-Prot : SWS_FT_FI2

33) chain B
residue 65
type MOD_RES
sequence S
description Phosphoserine; by DYRK2, MAPK1, MAPK3 and MTOR => ECO:0000269|PubMed:12588975, ECO:0000269|PubMed:12747827, ECO:0000269|PubMed:22578813, ECO:0000269|PubMed:25702871, ECO:0000269|PubMed:29750193, ECO:0007744|PubMed:17081983, ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:23186163, ECO:0007744|PubMed:24275569
source Swiss-Prot : SWS_FT_FI3

34) chain D
residue 65
type MOD_RES
sequence S
description Phosphoserine; by DYRK2, MAPK1, MAPK3 and MTOR => ECO:0000269|PubMed:12588975, ECO:0000269|PubMed:12747827, ECO:0000269|PubMed:22578813, ECO:0000269|PubMed:25702871, ECO:0000269|PubMed:29750193, ECO:0007744|PubMed:17081983, ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:23186163, ECO:0007744|PubMed:24275569
source Swiss-Prot : SWS_FT_FI3

35) chain B
residue 70
type MOD_RES
sequence T
description Phosphothreonine; by MTOR => ECO:0000269|PubMed:12747827, ECO:0000269|PubMed:22578813, ECO:0000269|PubMed:25702871, ECO:0000269|PubMed:29750193, ECO:0007744|PubMed:18220336, ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163, ECO:0007744|PubMed:24275569
source Swiss-Prot : SWS_FT_FI4

36) chain D
residue 70
type MOD_RES
sequence T
description Phosphothreonine; by MTOR => ECO:0000269|PubMed:12747827, ECO:0000269|PubMed:22578813, ECO:0000269|PubMed:25702871, ECO:0000269|PubMed:29750193, ECO:0007744|PubMed:18220336, ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163, ECO:0007744|PubMed:24275569
source Swiss-Prot : SWS_FT_FI4

37) chain B
residue 77
type MOD_RES
sequence T
description Phosphothreonine => ECO:0007744|PubMed:24275569
source Swiss-Prot : SWS_FT_FI5

38) chain D
residue 77
type MOD_RES
sequence T
description Phosphothreonine => ECO:0007744|PubMed:24275569
source Swiss-Prot : SWS_FT_FI5

39) chain C
residue 222
type MOD_RES
sequence K
description Phosphothreonine => ECO:0007744|PubMed:24275569
source Swiss-Prot : SWS_FT_FI5

40) chain B
residue 83
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:18669648
source Swiss-Prot : SWS_FT_FI6

41) chain D
residue 83
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:18669648
source Swiss-Prot : SWS_FT_FI6

42) chain B
residue 57
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000305|PubMed:22578813
source Swiss-Prot : SWS_FT_FI7

43) chain D
residue 57
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000305|PubMed:22578813
source Swiss-Prot : SWS_FT_FI7


Display surface

Download
Links