eF-site ID 4ura-B
PDB Code 4ura
Chain B

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Title Crystal structure of human JMJD2A in complex with compound 14a
Classification OXIDOREDUCTASE
Compound LYSINE-SPECIFIC DEMETHYLASE 4A
Source Homo sapiens (Human) (KDM4A_HUMAN)
Sequence B:  PSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVP
PKEWKPRASYDDIDDLVIPAPIQQLVTGQSGLFTQYNIQK
KAMTVREFRKIANSDKYCTPRYSEFEELERKYWKNLTFNP
PIYGADVNGTLYEKHVDEWNIGRLRTILDLVEKESGITIE
GVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWY
SVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLM
LKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAEST
NFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRKFQPERY
KLWKAGKDNTVIDHTLPTPEAAEF
Description


Functional site

1) chain B
residue 188
type
sequence H
description BINDING SITE FOR RESIDUE NI B 2501
source : AC4

2) chain B
residue 190
type
sequence E
description BINDING SITE FOR RESIDUE NI B 2501
source : AC4

3) chain B
residue 276
type
sequence H
description BINDING SITE FOR RESIDUE NI B 2501
source : AC4

4) chain B
residue 234
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 2502
source : AC5

5) chain B
residue 240
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 2502
source : AC5

6) chain B
residue 306
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 2502
source : AC5

7) chain B
residue 308
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 2502
source : AC5

8) chain B
residue 132
type
sequence Y
description BINDING SITE FOR RESIDUE LEL B 4000
source : AC6

9) chain B
residue 177
type
sequence Y
description BINDING SITE FOR RESIDUE LEL B 4000
source : AC6

10) chain B
residue 185
type
sequence F
description BINDING SITE FOR RESIDUE LEL B 4000
source : AC6

11) chain B
residue 188
type
sequence H
description BINDING SITE FOR RESIDUE LEL B 4000
source : AC6

12) chain B
residue 190
type
sequence E
description BINDING SITE FOR RESIDUE LEL B 4000
source : AC6

13) chain B
residue 206
type
sequence K
description BINDING SITE FOR RESIDUE LEL B 4000
source : AC6

14) chain B
residue 208
type
sequence W
description BINDING SITE FOR RESIDUE LEL B 4000
source : AC6

15) chain B
residue 241
type
sequence K
description BINDING SITE FOR RESIDUE LEL B 4000
source : AC6

16) chain B
residue 105
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 1354
source : AC8

17) chain B
residue 227
type
sequence F
description BINDING SITE FOR RESIDUE SO4 B 1354
source : AC9

18) chain B
residue 228
type
sequence P
description BINDING SITE FOR RESIDUE SO4 B 1354
source : AC9

19) chain B
residue 229
type
sequence G
description BINDING SITE FOR RESIDUE SO4 B 1354
source : AC9

20) chain B
residue 230
type
sequence S
description BINDING SITE FOR RESIDUE SO4 B 1354
source : AC9

21) chain B
residue 170
type catalytic
sequence G
description 370
source MCSA : MCSA2

22) chain B
residue 177
type catalytic
sequence Y
description 370
source MCSA : MCSA2

23) chain B
residue 188
type catalytic
sequence H
description 370
source MCSA : MCSA2

24) chain B
residue 190
type catalytic
sequence E
description 370
source MCSA : MCSA2

25) chain B
residue 276
type catalytic
sequence H
description 370
source MCSA : MCSA2

26) chain B
residue 288
type catalytic
sequence S
description 370
source MCSA : MCSA2

27) chain B
residue 132
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:16677698
source Swiss-Prot : SWS_FT_FI1

28) chain B
residue 198
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:16677698
source Swiss-Prot : SWS_FT_FI1

29) chain B
residue 206
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:16677698
source Swiss-Prot : SWS_FT_FI1

30) chain B
residue 188
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00538, ECO:0000269|PubMed:16677698, ECO:0000305|PubMed:26741168
source Swiss-Prot : SWS_FT_FI2

31) chain B
residue 276
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00538, ECO:0000269|PubMed:16677698, ECO:0000305|PubMed:26741168
source Swiss-Prot : SWS_FT_FI2

32) chain B
residue 190
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:16677698, ECO:0000305|PubMed:26741168
source Swiss-Prot : SWS_FT_FI3

33) chain B
residue 234
type BINDING
sequence C
description BINDING => ECO:0007744|PDB:5F2W, ECO:0007744|PDB:5F32, ECO:0007744|PDB:5F37, ECO:0007744|PDB:5F39, ECO:0007744|PDB:5F3E, ECO:0007744|PDB:5F3G, ECO:0007744|PDB:5F5I
source Swiss-Prot : SWS_FT_FI4

34) chain B
residue 240
type BINDING
sequence H
description BINDING => ECO:0007744|PDB:5F2W, ECO:0007744|PDB:5F32, ECO:0007744|PDB:5F37, ECO:0007744|PDB:5F39, ECO:0007744|PDB:5F3E, ECO:0007744|PDB:5F3G, ECO:0007744|PDB:5F5I
source Swiss-Prot : SWS_FT_FI4

35) chain B
residue 306
type BINDING
sequence C
description BINDING => ECO:0007744|PDB:5F2W, ECO:0007744|PDB:5F32, ECO:0007744|PDB:5F37, ECO:0007744|PDB:5F39, ECO:0007744|PDB:5F3E, ECO:0007744|PDB:5F3G, ECO:0007744|PDB:5F5I
source Swiss-Prot : SWS_FT_FI4

36) chain B
residue 308
type BINDING
sequence C
description BINDING => ECO:0007744|PDB:5F2W, ECO:0007744|PDB:5F32, ECO:0007744|PDB:5F37, ECO:0007744|PDB:5F39, ECO:0007744|PDB:5F3E, ECO:0007744|PDB:5F3G, ECO:0007744|PDB:5F5I
source Swiss-Prot : SWS_FT_FI4

37) chain B
residue 241
type BINDING
sequence K
description BINDING => ECO:0000250|UniProtKB:B2RXH2
source Swiss-Prot : SWS_FT_FI5


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