eF-site ID 4rf0-A PDB Code 4rf0 Chain A click to enlarge Title Crystal structure of the Middle-East respiratory syndrome coronavirus papain-like protease in complex with ubiquitin (space group P6522) Classification PROTEIN BINDING Compound ORF1ab protein Source Human betacoronavirus 2c Jordan-N3/2012 (RL40_HUMAN) Sequence A:  TIEVLVTVDGVNFRTVVLNNKNTYRSQLGCVFFNGADISD TIPDEKQNGHSLYLADNLTADETKALKELYGPVDPTFLHR FYSLKAAVHGWKMVVCDKVRSLKLSDNNCYLNAVIMTLDL LKDIKFVIPALQHAFMKHKGGDSTDFIALIMAYGNCTFGA PDDASRLLHTVLAKAELCCSARMVWREWCNVCGIKDVVLQ GLKACCYVGVQTVEDLRARMTYVCQCGGERHRQLVEHTTP WLLLSGTPNEKLVTTSTAPDFVAFNVFQGIETAVGHYVHA RLKGGLILKFDSGTVSKTSDWKCKVTDVLFPGQKYSSD Description (1)  ORF1ab protein, Ubiquitin-60S ribosomal protein L40 Functional site 1) chain A residue 1672 type sequence C description BINDING SITE FOR RESIDUE ZN A 1901 source : AC1 2) chain A residue 1675 type sequence C description BINDING SITE FOR RESIDUE ZN A 1901 source : AC1 3) chain A residue 1707 type sequence C description BINDING SITE FOR RESIDUE ZN A 1901 source : AC1 4) chain A residue 1709 type sequence C description BINDING SITE FOR RESIDUE ZN A 1901 source : AC1 5) chain A residue 1673 type sequence N description BINDING SITE FOR RESIDUE SO4 A 1902 source : AC2 6) chain A residue 1714 type sequence H description BINDING SITE FOR RESIDUE SO4 A 1902 source : AC2 7) chain A residue 1759 type sequence H description BINDING SITE FOR RESIDUE SO4 A 1902 source : AC2 8) chain A residue 1751 type sequence Q description BINDING SITE FOR RESIDUE SO4 A 1903 source : AC3 9) chain A residue 1752 type sequence G description BINDING SITE FOR RESIDUE SO4 A 1903 source : AC3 10) chain A residue 1787 type sequence K description BINDING SITE FOR RESIDUE SO4 A 1903 source : AC3 11) chain A residue 1659 type sequence E description BINDING SITE FOR RESIDUE SO4 A 1904 source : AC4 12) chain A residue 1660 type sequence L description BINDING SITE FOR RESIDUE SO4 A 1904 source : AC4 13) chain A residue 1684 type sequence G description BINDING SITE FOR RESIDUE SO4 A 1904 source : AC4 14) chain A residue 1685 type sequence L description BINDING SITE FOR RESIDUE SO4 A 1904 source : AC4 15) chain A residue 1686 type sequence K description BINDING SITE FOR RESIDUE SO4 A 1904 source : AC4 16) chain A residue 1668 type sequence W description BINDING SITE FOR RESIDUE SO4 A 1905 source : AC5 17) chain A residue 1670 type sequence E description BINDING SITE FOR RESIDUE SO4 A 1905 source : AC5 18) chain A residue 1715 type sequence R description BINDING SITE FOR RESIDUE SO4 A 1905 source : AC5 19) chain A residue 1652 type sequence H description BINDING SITE FOR RESIDUE SO4 A 1906 source : AC6 20) chain A residue 1655 type sequence L description BINDING SITE FOR RESIDUE SO4 A 1906 source : AC6 21) chain A residue 1656 type sequence A description BINDING SITE FOR RESIDUE SO4 A 1906 source : AC6 22) chain A residue 1686 type sequence K description BINDING SITE FOR RESIDUE SO4 A 1906 source : AC6 23) chain A residue 1689 type sequence C description BINDING SITE FOR RESIDUE SO4 A 1906 source : AC6 24) chain A residue 1582 type sequence V description BINDING SITE FOR RESIDUE SO4 A 1907 source : AC7 25) chain A residue 1602 type sequence D description BINDING SITE FOR RESIDUE SO4 A 1907 source : AC7 26) chain A residue 1764 type sequence R description BINDING SITE FOR RESIDUE SO4 A 1907 source : AC7 27) chain A residue 1515 type sequence F description BINDING SITE FOR RESIDUE SO4 A 1908 source : AC8 28) chain A residue 1565 type sequence Y description BINDING SITE FOR RESIDUE SO4 A 1908 source : AC8 29) chain A residue 1568 type sequence K description BINDING SITE FOR RESIDUE SO4 A 1908 source : AC8 30) chain A residue 1590 type sequence N description BINDING SITE FOR RESIDUE 3CN B 101 source : AC9 31) chain A residue 1592 type sequence C description BINDING SITE FOR RESIDUE 3CN B 101 source : AC9 32) chain A residue 1673 type sequence N description BINDING SITE FOR RESIDUE 3CN B 101 source : AC9 33) chain A residue 1758 type sequence G description BINDING SITE FOR RESIDUE 3CN B 101 source : AC9 34) chain A residue 1759 type sequence H description BINDING SITE FOR RESIDUE 3CN B 101 source : AC9 35) chain A residue 1705 type sequence Y description BINDING SITE FOR RESIDUE SO4 B 102 source : BC1 36) chain A residue 1715 type sequence R description BINDING SITE FOR RESIDUE SO4 B 102 source : BC1

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