eF-site ID 1gkd-B
PDB Code 1gkd
Chain B

click to enlarge
Title MMP9 active site mutant-inhibitor complex
Classification HYDROLASE
Compound 92 KDA TYPE IV COLLAGENASE
Source Homo sapiens (Human) (MM09_HUMAN)
Sequence B:  LKWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWSAVTP
LTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFP
PGPGIQGDAHFDDDELWSLGKGQGYSLFLVAAHQFGHALG
LDHSSVPEALMYPMYRFTEGPPLHKDDVNGIRHLY
Description


Functional site

1) chain B
residue 182
type
sequence D
description BINDING SITE FOR RESIDUE CA B1444
source : AC7

2) chain B
residue 183
type
sequence G
description BINDING SITE FOR RESIDUE CA B1444
source : AC7

3) chain B
residue 185
type
sequence D
description BINDING SITE FOR RESIDUE CA B1444
source : AC7

4) chain B
residue 187
type
sequence L
description BINDING SITE FOR RESIDUE CA B1444
source : AC7

5) chain B
residue 205
type
sequence D
description BINDING SITE FOR RESIDUE CA B1444
source : AC7

6) chain B
residue 208
type
sequence E
description BINDING SITE FOR RESIDUE CA B1444
source : AC7

7) chain B
residue 165
type
sequence D
description BINDING SITE FOR RESIDUE CA B1445
source : AC8

8) chain B
residue 197
type
sequence G
description BINDING SITE FOR RESIDUE CA B1445
source : AC8

9) chain B
residue 199
type
sequence Q
description BINDING SITE FOR RESIDUE CA B1445
source : AC8

10) chain B
residue 201
type
sequence D
description BINDING SITE FOR RESIDUE CA B1445
source : AC8

11) chain B
residue 131
type
sequence D
description BINDING SITE FOR RESIDUE CA B1446
source : AC9

12) chain B
residue 206
type
sequence D
description BINDING SITE FOR RESIDUE CA B1446
source : AC9

13) chain B
residue 208
type
sequence E
description BINDING SITE FOR RESIDUE CA B1446
source : AC9

14) chain B
residue 211
type
sequence S
description BINDING SITE FOR RESIDUE CA B1447
source : BC1

15) chain B
residue 212
type
sequence L
description BINDING SITE FOR RESIDUE CA B1447
source : BC1

16) chain B
residue 213
type
sequence G
description BINDING SITE FOR RESIDUE CA B1447
source : BC1

17) chain B
residue 214
type
sequence K
description BINDING SITE FOR RESIDUE CA B1447
source : BC1

18) chain B
residue 215
type
sequence G
description BINDING SITE FOR RESIDUE CA B1447
source : BC1

19) chain B
residue 401
type
sequence H
description BINDING SITE FOR RESIDUE ZN B1450
source : BC2

20) chain B
residue 405
type
sequence H
description BINDING SITE FOR RESIDUE ZN B1450
source : BC2

21) chain B
residue 411
type
sequence H
description BINDING SITE FOR RESIDUE ZN B1450
source : BC2

22) chain B
residue 175
type
sequence H
description BINDING SITE FOR RESIDUE ZN B1451
source : BC3

23) chain B
residue 177
type
sequence D
description BINDING SITE FOR RESIDUE ZN B1451
source : BC3

24) chain B
residue 190
type
sequence H
description BINDING SITE FOR RESIDUE ZN B1451
source : BC3

25) chain B
residue 203
type
sequence H
description BINDING SITE FOR RESIDUE ZN B1451
source : BC3

26) chain B
residue 187
type
sequence L
description BINDING SITE FOR RESIDUE STN B1448
source : BC6

27) chain B
residue 188
type
sequence L
description BINDING SITE FOR RESIDUE STN B1448
source : BC6

28) chain B
residue 189
type
sequence A
description BINDING SITE FOR RESIDUE STN B1448
source : BC6

29) chain B
residue 402
type
sequence Q
description BINDING SITE FOR RESIDUE STN B1448
source : BC6

30) chain B
residue 405
type
sequence H
description BINDING SITE FOR RESIDUE STN B1448
source : BC6

31) chain B
residue 411
type
sequence H
description BINDING SITE FOR RESIDUE STN B1448
source : BC6

32) chain B
residue 422
type
sequence M
description BINDING SITE FOR RESIDUE STN B1448
source : BC6

33) chain B
residue 423
type
sequence Y
description BINDING SITE FOR RESIDUE STN B1448
source : BC6

34) chain B
residue 186
type
sequence G
description BINDING SITE FOR RESIDUE BUM B1449
source : BC7

35) chain B
residue 421
type
sequence P
description BINDING SITE FOR RESIDUE BUM B1449
source : BC7

36) chain B
residue 423
type
sequence Y
description BINDING SITE FOR RESIDUE BUM B1449
source : BC7

37) chain B
residue 131
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

38) chain B
residue 165
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

39) chain B
residue 182
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

40) chain B
residue 183
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

41) chain B
residue 185
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

42) chain B
residue 187
type BINDING
sequence L
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

43) chain B
residue 197
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

44) chain B
residue 199
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

45) chain B
residue 201
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

46) chain B
residue 205
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

47) chain B
residue 206
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

48) chain B
residue 208
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

49) chain B
residue 190
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:12051944, ECO:0000269|PubMed:12077439
source Swiss-Prot : SWS_FT_FI3

50) chain B
residue 203
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:12051944, ECO:0000269|PubMed:12077439
source Swiss-Prot : SWS_FT_FI3

51) chain B
residue 175
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:12051944, ECO:0000269|PubMed:12077439
source Swiss-Prot : SWS_FT_FI3

52) chain B
residue 177
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944, ECO:0000269|PubMed:12077439
source Swiss-Prot : SWS_FT_FI3

53) chain B
residue 120
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI4

54) chain B
residue 127
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI4


Display surface

Download
Links