Pairwise fitting pdb-4v5m on pdb-4v6o by gmfit










Pairwise fitting of target pdb-4v5m on reference pdb-4v6o by gmfit(PID:152757).





RANK[1] Corr.Coeff:0.914

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-4v5m)

display:



color:



 [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-4v5m)]







REFERENCE(pdb-4v6o)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.914
0.816
0.798
0.784
0.772
0.735
0.725
0.724
0.709
0.706







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4v6o"(PDB-format) or 
 "4v6o"(mmCIF-format), and read it.

  2.  Download the Target molecule "4v5m"(PDB-format) or
  "4v5m"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.516081,-0.679886,0.520976 7.341342 center 0,0,0 model #1
move -2.936278,-0.585078,-0.277253 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!