Pairwise fitting pdb-4v5m on pdb-3jcd by gmfit










Pairwise fitting of target pdb-4v5m on reference pdb-3jcd by gmfit(PID:567425).





RANK[1] Corr.Coeff:0.931

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-4v5m)

display:



color:



 [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-4v5m)]







REFERENCE(pdb-3jcd)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.931
0.821
0.783
0.774
0.760
0.751
0.748
0.739
0.738
0.733







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3jcd"(PDB-format) or 
 "3jcd"(mmCIF-format), and read it.

  2.  Download the Target molecule "4v5m"(PDB-format) or
  "4v5m"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.687994,-0.357983,0.631278 65.372383 center 0,0,0 model #1
move 205.513328,207.565155,211.622398 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!