Pairwise fitting pdb-4v4v on pdb-4v7a by gmfit










Pairwise fitting of target pdb-4v4v on reference pdb-4v7a by gmfit(PID:4148772).





RANK[1] Corr.Coeff:0.923

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-4v4v)

display:



color:



 [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-4v4v)]







REFERENCE(pdb-4v7a)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.923
0.769
0.763
0.746
0.739
0.737
0.726
0.721
0.718
0.717







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4v7a"(PDB-format) or 
 "4v7a"(mmCIF-format), and read it.

  2.  Download the Target molecule "4v4v"(PDB-format) or
  "4v4v"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.783283,-0.211723,0.584501 137.773556 center 0,0,0 model #1
move 178.129848,188.231659,168.487845 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 4v7a)]

[Download the target GMM(pdb 4v4v)]

[Download gmfit result file(4148772)]