Pairwise fitting pdb-4v4v on pdb-4v7a by gmfit



Pairwise fitting of target pdb-4v4v on reference pdb-4v7a by gmfit(PID:4060056).

RANK[1] Corr.Coeff:0.923 [JSmol] [Molmil]
TARGET(pdb-4v4v)
display:
color:
[Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-4v4v)]
REFERENCE(pdb-4v7a)
display:
color:
[Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.923 0.769 0.763 0.746 0.739 0.737 0.726 0.721 0.718 0.717

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "4v7a"(PDB-format) or "4v7a"(mmCIF-format), and read it.
  2. Download the Target molecule "4v4v"(PDB-format) or "4v4v"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.783283,-0.211723,0.584501 137.773556 center 0,0,0 model #1
    move 178.129848,188.231659,168.487845 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(pdb 4v7a)] [Download the target GMM(pdb 4v4v)] [Download gmfit result file(4060056)]