Pairwise fitting pdb-4v4v on pdb-4v6n by gmfit










Pairwise fitting of target pdb-4v4v on reference pdb-4v6n by gmfit(PID:4112727).





RANK[1] Corr.Coeff:0.937

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-4v4v)

display:



color:



 [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-4v4v)]







REFERENCE(pdb-4v6n)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.937
0.758
0.754
0.740
0.739
0.733
0.721
0.716
0.715
0.714







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4v6n"(PDB-format) or 
 "4v6n"(mmCIF-format), and read it.

  2.  Download the Target molecule "4v4v"(PDB-format) or
  "4v4v"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.503925,-0.824134,-0.258577 1.649738 center 0,0,0 model #1
move 10.074435,2.337127,2.188293 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 4v6n)]

[Download the target GMM(pdb 4v4v)]

[Download gmfit result file(4112727)]