Pairwise fitting pdb-4v4v on pdb-3j9w by gmfit










Pairwise fitting of target pdb-4v4v on reference pdb-3j9w by gmfit(PID:187449).





RANK[1] Corr.Coeff:0.934

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-4v4v)

display:



color:



 [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-4v4v)]







REFERENCE(pdb-3j9w)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.934
0.768
0.763
0.757
0.751
0.751
0.742
0.733
0.722
0.721







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j9w"(PDB-format) or 
 "3j9w"(mmCIF-format), and read it.

  2.  Download the Target molecule "4v4v"(PDB-format) or
  "4v4v"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.690657,0.722923,-0.019356 175.612900 center 0,0,0 model #1
move 196.491560,197.358070,186.185795 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!