Pairwise fitting pdb-4v47 on pdb-4v7a by gmfit










Pairwise fitting of target pdb-4v47 on reference pdb-4v7a by gmfit(PID:912218).





RANK[1] Corr.Coeff:0.910

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-4v47)

display:



color:



 [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-4v47)]







REFERENCE(pdb-4v7a)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
rank
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Corr.Coeff.
0.910
0.743
0.738
0.723
0.714
0.714
0.711
0.694
0.680
0.676







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4v7a"(PDB-format) or 
 "4v7a"(mmCIF-format), and read it.

  2.  Download the Target molecule "4v47"(PDB-format) or
  "4v47"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.756267,-0.226777,0.613703 136.495350 center 0,0,0 model #1
move 176.167425,180.284127,177.105903 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 4v7a)]

[Download the target GMM(pdb 4v47)]

[Download gmfit result file(912218)]