Pairwise fitting pdb-4v47 on pdb-4v79 by gmfit










Pairwise fitting of target pdb-4v47 on reference pdb-4v79 by gmfit(PID:4103001).





RANK[1] Corr.Coeff:0.922

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-4v47)

display:



color:



 [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-4v47)]







REFERENCE(pdb-4v79)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.922
0.750
0.745
0.742
0.741
0.734
0.723
0.719
0.713
0.710







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4v79"(PDB-format) or 
 "4v79"(mmCIF-format), and read it.

  2.  Download the Target molecule "4v47"(PDB-format) or
  "4v47"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.757571,-0.221748,0.613934 134.429130 center 0,0,0 model #1
move 179.153018,180.629231,183.261283 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 4v79)]

[Download the target GMM(pdb 4v47)]

[Download gmfit result file(4103001)]