Pairwise fitting pdb-4v47 on pdb-4v79 by gmfit



Pairwise fitting of target pdb-4v47 on reference pdb-4v79 by gmfit(PID:4103001).

RANK[1] Corr.Coeff:0.922 [JSmol] [Molmil]
TARGET(pdb-4v47)
display:
color:
[Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-4v47)]
REFERENCE(pdb-4v79)
display:
color:
[Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.922 0.750 0.745 0.742 0.741 0.734 0.723 0.719 0.713 0.710

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "4v79"(PDB-format) or "4v79"(mmCIF-format), and read it.
  2. Download the Target molecule "4v47"(PDB-format) or "4v47"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.757571,-0.221748,0.613934 134.429130 center 0,0,0 model #1
    move 179.153018,180.629231,183.261283 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(pdb 4v79)] [Download the target GMM(pdb 4v47)] [Download gmfit result file(4103001)]