Pairwise fitting pdb-4v47 on pdb-4v6w by gmfit










Pairwise fitting of target pdb-4v47 on reference pdb-4v6w by gmfit(PID:568879).





RANK[1] Corr.Coeff:0.855

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-4v47)

display:



color:



 [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-4v47)]







REFERENCE(pdb-4v6w)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.855
0.793
0.768
0.766
0.753
0.751
0.741
0.736
0.732
0.714







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4v6w"(PDB-format) or 
 "4v6w"(mmCIF-format), and read it.

  2.  Download the Target molecule "4v47"(PDB-format) or
  "4v47"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.485363,0.190611,-0.853282 5.632143 center 0,0,0 model #1
move 0.718732,-3.096950,0.838470 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!