Pairwise fitting pdb-4v47 on emdb-2977 by gmfit










Pairwise fitting of target pdb-4v47 on reference emdb-2977 by gmfit(PID:16973).





RANK[1] Corr.Coeff:0.912

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-4v47)

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 [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-4v47)]







REFERENCE(emdb-2977)

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Time-resolved Cryo Electron Microscopy of ribosome subunit association [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.912
0.880
0.704
0.690
0.672
0.670
0.667
0.655
0.631
0.623







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2977.map.gz", and read it.

  2.  Download the Target molecule "4v47"(PDB-format) or
  "4v47"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.707262,-0.702949,0.075117 172.653503 center 0,0,0 model #1
move 184.152108,179.549016,177.332071 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 2977)]

[Download the target GMM(pdb 4v47)]

[Download gmfit result file(16973)]