Pairwise fitting pdb-4v47 on emdb-1324 by gmfit



Pairwise fitting of target pdb-4v47 on reference emdb-1324 by gmfit(PID:4112443).

RANK[1] Corr.Coeff:0.795 [JSmol] [Molmil]
TARGET(pdb-4v47)
display:
color:
[Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-4v47)]
REFERENCE(emdb-1324)
display:
color:
Spontaneous reverse movement of mRNA-bound tRNA through the ribosome. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.795 0.630 0.625 0.614 0.607 0.605 0.603 0.602 0.600 0.597

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1324.map.gz", and read it.
  2. Download the Target molecule "4v47"(PDB-format) or "4v47"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.788522,-0.199344,0.581804 130.158328 center 0,0,0 model #1
    move 177.745442,180.551712,186.621200 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1324)] [Download the target GMM(pdb 4v47)] [Download gmfit result file(4112443)]