Pairwise fitting pdb-4v47 on emdb-1064 by gmfit



Pairwise fitting of target pdb-4v47 on reference emdb-1064 by gmfit(PID:4114037).

RANK[1] Corr.Coeff:0.684 [JSmol] [Molmil]
TARGET(pdb-4v47)
display:
color:
[Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-4v47)]
REFERENCE(emdb-1064)
display:
color:
Visualization of release factor 3 on the ribosome during termination of protein synthesis. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.684 0.623 0.594 0.592 0.592 0.589 0.583 0.580 0.574 0.573

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1064.map.gz", and read it.
  2. Download the Target molecule "4v47"(PDB-format) or "4v47"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.597048,-0.508900,0.620125 162.182317 center 0,0,0 model #1
    move -3.914658,-0.667004,-2.344073 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1064)] [Download the target GMM(pdb 4v47)] [Download gmfit result file(4114037)]