Pairwise fitting pdb-3j0f on pdb-2fte by gmfit










Pairwise fitting of target pdb-3j0f on reference pdb-2fte by gmfit(PID:479934).





RANK[1] Corr.Coeff:0.385

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3j0f)

display:



color:



b'SINDBIS VIRION                                                        ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3j0f)]







REFERENCE(pdb-2fte)

display:



color:


b'BACTERIOPHAGE HK97 EXPANSION INTERMEDIATE IV                          ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.385
0.305
0.293
0.263
0.259
0.251
0.250
0.248
0.247
0.227







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2fte"(PDB-format) or 
 "2fte"(mmCIF-format), and read it.

  2.  Download the Target molecule "3j0f"(PDB-format) or
  "3j0f"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.074189,0.642911,-0.762340 10.522898 center 0,0,0 model #1
move -25.222700,18.673834,2.404309 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!