Pairwise fitting pdb-3izd on pdb-3j7t by gmfit










Pairwise fitting of target pdb-3izd on reference pdb-3j7t by gmfit(PID:660819).





RANK[1] Corr.Coeff:0.334

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3izd)

display:



color:



b'MODEL OF THE LARGE SUBUNIT RNA EXPANSION SEGMENT ES27L-OUT BASED ON A ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3izd)]







REFERENCE(pdb-3j7t)

display:



color:


b'CALCIUM ATPASE STRUCTURE WITH TWO BOUND CALCIUM IONS DETERMINED BY    ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.334
0.294
0.279
0.276
0.275
0.226
0.216
0.198
0.181
0.107







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j7t"(PDB-format) or 
 "3j7t"(mmCIF-format), and read it.

  2.  Download the Target molecule "3izd"(PDB-format) or
  "3izd"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.419023,-0.852897,0.311425 156.053521 center 0,0,0 model #1
move 22.770279,-85.905495,81.605001 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!