Pairwise fitting pdb-3gzu on pdb-2yew by gmfit










Pairwise fitting of target pdb-3gzu on reference pdb-2yew by gmfit(PID:364292).





RANK[1] Corr.Coeff:0.485

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3gzu)

display:



color:



b'VP7 RECOATED ROTAVIRUS DLP                                            ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3gzu)]







REFERENCE(pdb-2yew)

display:



color:


b'MODELING BARMAH FOREST VIRUS STRUCTURAL PROTEINS                      ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.485
0.458
0.433
0.427
0.409
0.405
0.380
0.378
0.356
0.351







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2yew"(PDB-format) or 
 "2yew"(mmCIF-format), and read it.

  2.  Download the Target molecule "3gzu"(PDB-format) or
  "3gzu"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.732316,-0.087937,-0.675263 168.980894 center 0,0,0 model #1
move -144.454824,218.566911,164.502057 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!