Pairwise fitting pdb-3gzu on emdb-6152 by gmfit










Pairwise fitting of target pdb-3gzu on reference emdb-6152 by gmfit(PID:18487).





RANK[1] Corr.Coeff:0.491

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3gzu)

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b'VP7 RECOATED ROTAVIRUS DLP                                            ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3gzu)]







REFERENCE(emdb-6152)

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Structures of Protective Antibodies Reveal Sites of Vulnerability on Ebola Virus [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.491
0.459
0.457
0.428
0.408
0.398
0.397
0.395
0.390
0.362







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6152.map.gz", and read it.

  2.  Download the Target molecule "3gzu"(PDB-format) or
  "3gzu"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.617006,0.447594,0.647274 140.232590 center 0,0,0 model #1
move 428.664693,114.028589,239.071704 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 6152)]

[Download the target GMM(pdb 3gzu)]

[Download gmfit result file(18487)]