Pairwise fitting pdb-3gzu on emdb-1976 by gmfit



Pairwise fitting of target pdb-3gzu on reference emdb-1976 by gmfit(PID:4108554).

RANK[1] Corr.Coeff:0.519 [JSmol] [Molmil]
TARGET(pdb-3gzu)
display:
color:
b'VP7 RECOATED ROTAVIRUS DLP ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-3gzu)]
REFERENCE(emdb-1976)
display:
color:
Functional reconstitution of the 13-subunit human translation initiation factor eIF3. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.519 0.455 0.446 0.439 0.425 0.413 0.399 0.396 0.386 0.381

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1976.map.gz", and read it.
  2. Download the Target molecule "3gzu"(PDB-format) or "3gzu"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.875867,0.482468,-0.009062 92.552598 center 0,0,0 model #1
    move -38.959796,282.524248,88.186878 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1976)] [Download the target GMM(pdb 3gzu)] [Download gmfit result file(4108554)]