Pairwise fitting pdb-3gzu on emdb-1727 by gmfit










Pairwise fitting of target pdb-3gzu on reference emdb-1727 by gmfit(PID:4147359).





RANK[1] Corr.Coeff:0.579

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3gzu)

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b'VP7 RECOATED ROTAVIRUS DLP                                            ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3gzu)]







REFERENCE(emdb-1727)

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Ribosome dynamics and tRNA movement as visualized by time-resolved electron cryomicroscopy [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.579
0.562
0.557
0.545
0.539
0.529
0.527
0.522
0.508
0.504







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1727.map.gz", and read it.

  2.  Download the Target molecule "3gzu"(PDB-format) or
  "3gzu"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.506843,0.637954,0.579763 110.169252 center 0,0,0 model #1
move 382.684739,-5.323670,249.989934 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1727)]

[Download the target GMM(pdb 3gzu)]

[Download gmfit result file(4147359)]