Pairwise fitting pdb-3gzu on emdb-1238 by gmfit










Pairwise fitting of target pdb-3gzu on reference emdb-1238 by gmfit(PID:4194198).





RANK[1] Corr.Coeff:0.120

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3gzu)

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b'VP7 RECOATED ROTAVIRUS DLP                                            ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3gzu)]







REFERENCE(emdb-1238)

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Infectious bursal disease virus capsid assembly and maturation by structural rearrangements of a transient molecular switch. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.120
0.074
0.000
0.000
0.000
0.000
0.000
0.000
0.000
0.000







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1238.map.gz", and read it.

  2.  Download the Target molecule "3gzu"(PDB-format) or
  "3gzu"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.029566,0.156668,0.987209 133.809473 center 0,0,0 model #1
move 738.881990,588.470126,373.745411 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1238)]

[Download the target GMM(pdb 3gzu)]

[Download gmfit result file(4194198)]