Pairwise fitting pdb-3gzu on emdb-1118 by gmfit










Pairwise fitting of target pdb-3gzu on reference emdb-1118 by gmfit(PID:655100).





RANK[1] Corr.Coeff:0.017

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3gzu)

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b'VP7 RECOATED ROTAVIRUS DLP                                            ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3gzu)]







REFERENCE(emdb-1118)

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Structural polymorphism of the major capsid protein of a double-stranded RNA virus: an amphipathic alpha helix as a molecular switch. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.017
0.017
0.017
0.017
0.017
0.017
0.017
0.017
0.017
0.017







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1118.map.gz", and read it.

  2.  Download the Target molecule "3gzu"(PDB-format) or
  "3gzu"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.899739,0.381211,-0.212482 167.863499 center 0,0,0 model #1
move -162.680344,140.940826,185.498850 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!