Pairwise fitting pdb-2zz9 on pdb-4utq by gmfit



Pairwise fitting of target pdb-2zz9 on reference pdb-4utq by gmfit(PID:4099131).

RANK[1] Corr.Coeff:0.444 [JSmol] [Molmil]
TARGET(pdb-2zz9)
display:
color:
b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-2zz9)]
REFERENCE(pdb-4utq)
display:
color:
b'A STRUCTURAL MODEL OF THE ACTIVE RIBOSOME-BOUND MEMBRANE PROTEIN ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.444 0.430 0.411 0.404 0.403 0.399 0.391 0.383 0.380 0.362

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "4utq"(PDB-format) or "4utq"(mmCIF-format), and read it.
  2. Download the Target molecule "2zz9"(PDB-format) or "2zz9"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.086264,-0.925898,0.367792 109.263525 center 0,0,0 model #1
    move 147.986553,124.022481,10.647890 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(pdb 4utq)] [Download the target GMM(pdb 2zz9)] [Download gmfit result file(4099131)]