Pairwise fitting pdb-2zz9 on pdb-4cg5 by gmfit










Pairwise fitting of target pdb-2zz9 on reference pdb-4cg5 by gmfit(PID:1280217).





RANK[1] Corr.Coeff:0.566

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-2zz9)

display:



color:



b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-2zz9)]







REFERENCE(pdb-4cg5)

display:



color:


b'CRYO-EM OF THE SEC61-COMPLEX BOUND TO THE 80S RIBOSOME TRANSLATING A  ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.566
0.529
0.528
0.527
0.517
0.514
0.514
0.513
0.503
0.481







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4cg5"(PDB-format) or 
 "4cg5"(mmCIF-format), and read it.

  2.  Download the Target molecule "2zz9"(PDB-format) or
  "2zz9"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.541310,-0.676507,0.499321 134.228970 center 0,0,0 model #1
move 249.134478,1.380718,101.836998 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!