Pairwise fitting pdb-2zz9 on pdb-3j93 by gmfit










Pairwise fitting of target pdb-2zz9 on reference pdb-3j93 by gmfit(PID:468186).





RANK[1] Corr.Coeff:0.514

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-2zz9)

display:



color:



b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-2zz9)]







REFERENCE(pdb-3j93)

display:



color:


b'FITTING OF FAB INTO THE CRYOEM DENSITY MAP OF EV71 PROCAPSID IN       ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.514
0.513
0.508
0.487
0.485
0.469
0.468
0.460
0.449
0.447







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j93"(PDB-format) or 
 "3j93"(mmCIF-format), and read it.

  2.  Download the Target molecule "2zz9"(PDB-format) or
  "2zz9"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.379842,-0.842224,0.382595 147.572805 center 0,0,0 model #1
move 154.157443,-46.273921,-47.058928 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!