Pairwise fitting pdb-2zz9 on pdb-3j6m by gmfit



Pairwise fitting of target pdb-2zz9 on reference pdb-3j6m by gmfit(PID:4060141).

RANK[1] Corr.Coeff:0.650 [JSmol] [Molmil]
TARGET(pdb-2zz9)
display:
color:
b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-2zz9)]
REFERENCE(pdb-3j6m)
display:
color:
b'KINETIC AND STRUCTURAL ANALYSIS OF COXSACKIEVIRUS B3 RECEPTOR ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.650 0.633 0.632 0.625 0.606 0.605 0.585 0.579 0.577 0.576

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "3j6m"(PDB-format) or "3j6m"(mmCIF-format), and read it.
  2. Download the Target molecule "2zz9"(PDB-format) or "2zz9"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.651905,0.422279,-0.629841 159.072557 center 0,0,0 model #1
    move -82.909179,79.973952,204.458183 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(pdb 3j6m)] [Download the target GMM(pdb 2zz9)] [Download gmfit result file(4060141)]