Pairwise fitting pdb-2zz9 on pdb-3j4g by gmfit



Pairwise fitting of target pdb-2zz9 on reference pdb-3j4g by gmfit(PID:1291513).

RANK[1] Corr.Coeff:0.658 [JSmol] [Molmil]
TARGET(pdb-2zz9)
display:
color:
b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-2zz9)]
REFERENCE(pdb-3j4g)
display:
color:
b'STRUCTURE OF LYSOZYME SOLVED BY MICROED TO 2.9 A ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.658 0.647 0.647 0.631 0.626 0.616 0.614 0.612 0.609 0.590

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "3j4g"(PDB-format) or "3j4g"(mmCIF-format), and read it.
  2. Download the Target molecule "2zz9"(PDB-format) or "2zz9"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.114755,0.774115,0.622557 113.405189 center 0,0,0 model #1
    move -66.646924,-136.224670,-38.354925 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!