Pairwise fitting pdb-2zz9 on pdb-3iy3 by gmfit



Pairwise fitting of target pdb-2zz9 on reference pdb-3iy3 by gmfit(PID:4150276).

RANK[1] Corr.Coeff:0.697 [JSmol] [Molmil]
TARGET(pdb-2zz9)
display:
color:
b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-2zz9)]
REFERENCE(pdb-3iy3)
display:
color:
b'VARIABLE DOMAINS OF THE COMPUTER GENERATED MODEL (WAM) OF FAB 8 FITTED' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.697 0.663 0.662 0.660 0.653 0.641 0.637 0.633 0.629 0.621

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "3iy3"(PDB-format) or "3iy3"(mmCIF-format), and read it.
  2. Download the Target molecule "2zz9"(PDB-format) or "2zz9"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.976633,0.113736,-0.182352 95.736522 center 0,0,0 model #1
    move 35.569655,97.410738,93.986896 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(pdb 3iy3)] [Download the target GMM(pdb 2zz9)] [Download gmfit result file(4150276)]