Pairwise fitting pdb-2zz9 on pdb-2zhc by gmfit



Pairwise fitting of target pdb-2zz9 on reference pdb-2zhc by gmfit(PID:4121400).

RANK[1] Corr.Coeff:0.724 [JSmol] [Molmil]
TARGET(pdb-2zz9)
display:
color:
b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-2zz9)]
REFERENCE(pdb-2zhc)
display:
color:
b'PARM FILAMENT ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.724 0.685 0.683 0.677 0.668 0.663 0.659 0.658 0.656 0.619

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "2zhc"(PDB-format) or "2zhc"(mmCIF-format), and read it.
  2. Download the Target molecule "2zz9"(PDB-format) or "2zz9"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.657893,-0.712894,0.242817 120.147811 center 0,0,0 model #1
    move 84.900482,-85.643948,449.273918 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(pdb 2zhc)] [Download the target GMM(pdb 2zz9)] [Download gmfit result file(4121400)]